Job Description Q06067 Confidence 61.10% Date Thu Jan 5 12:33:25 GMT 2012 Rank 139 Aligned Residues 117 % Identity 10% Template c3b42B_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:methyl-accepting chemotaxis protein, putative; PDBTitle: periplasmic sensor domain of chemotaxis protein gsu0935 Resolution 1.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	S	A	V	V	N	L	L	N	Q	A	L	G	D	R	Y	D	L	Y	I	D	L	P	R	E	E	R	I	R	A	L	N	A	E	L	A	P	I	T	E	N	I	T	H	A	F	P	G	I	G	A	G	Y	Y	N	K	M	L	D	A	I	I	T	Y	A	P	S	A	L	Y	Q	N	N	V	G	V	T	I
Query Conservation
Alig confidence																													.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	Q	L	K	N	A	R	N	L	A	G	L	I	I	H	D	I	D	G	Y	M	M	K	G	D	S	.	.	.	.	.	.	.	S	E	V	D	R	F	I	S	A	V	K	S	K	N	F	I	M	D	L	R	V	F	D	E	Q	A	K	E	V	S	.	.	.	.	.	.	.	.	.	.	.	P	T	P	S	Q
Template Known Secondary structure																									T	T		G	.	.	.	.	.	.	.	G	G										S	T	T	S	S								T	T	S					.	.	.	.	.	.	.	.	.	.	.	S	S			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.												.	.	.	.	300
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.											.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	D	H	P	G	R	E	V	M	R	T	N	T	P	L	V	Y	S	G	R	Q	V	R	G	D	I	L	N	S	M	L	P	I	E	R	N	.	.	.	.	.	.	.	.	.	.	G	E	I	L	G	Y	I	W	A	N	E	L	T	E	D	I	R	R
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	N	A	K	I	Q	Q	A	I	A	A	G	R	T	L	E	F	K	E	T	L	D	G	K	R	T	L	S	L	V	L	P	F	P	N	E	Q	R	C	Q	S	C	H	D	A	G	A	A	Y	L	G	G	L	L	V	T	T	S	I	E	E	G	Y	E
Template Known Secondary structure		S												T										T	T														T	G	G	G	G	T	S		T	T		S												G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions