Job Description Q06067 Confidence 98.00% Date Thu Jan 5 12:33:25 GMT 2012 Rank 58 Aligned Residues 102 % Identity 23% Template c3b33A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the pas domain of nitrogen regulation protein2 nr(ii) from vibrio parahaemolyticus Resolution 1.83 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		I	I	E	N	A	A	D	G	V	I	A	I	D	R	Q	G	D	V	T	T	M	N	P	A	A	E	V	I	T	G	Y	Q	R	H	E	L	V	G	Q	P	Y	S	M	L	F	.	D	N	T	Q	F	Y	S	P	V	L	D	T	L	E	H	G	T	E	H	V	A	L	E	I	S	F	P	G	R	D	R	T	I	E
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		I	L	N	N	X	V	T	A	T	L	I	L	D	D	G	L	A	I	R	Y	A	N	P	A	A	E	L	L	F	S	Q	S	A	K	R	I	V	E	Q	S	L	S	Q	L	I	Q	H	A	S	L	D	L	A	L	L	T	Q	P	L	Q	S	G	Q	S	I	T	D	S	D	V	T	F	V	V	D	G	R	P	L	X
Template Known Secondary structure							S	S							T	T		B												T	T	S						T	T		B						S						T																							T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	T	T	S	R	I	H	N	T	H	G	E	M	I	G	A	L	V	I	F	S	D	L
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		L	E	V	T	V	S	P	I	T	W	Q	R	Q	.	.	L	X	L	L	V	E	X	R	K	I
Template Known Secondary structure												T	T		.	.
Template Predicted Secondary structure															.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions