Job Description Q06067 Confidence 98.42% Date Thu Jan 5 12:33:25 GMT 2012 Rank 40 Aligned Residues 137 % Identity 14% Template c2v1bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nph1-1; PDBTitle: n- and c-terminal helices of oat lov2 (404-546) are2 involved in light-induced signal transduction (room3 temperature (293k) light structure of lov2 (404-546)) Resolution 1.55 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																										.	.	.
Query SS confidence																		.	.	.																																										.	.	.
Query Sequence		N	D	L	I	I	E	N	A	A	D	G	V	I	A	I	D	.	.	.	R	Q	G	D	V	T	T	M	N	P	A	A	E	V	I	T	G	Y	Q	R	H	E	L	V	G	Q	P	Y	S	M	L	F	D	N	T	Q	F	Y	S	P	V	.	.	.	L	D	T	L	E	H	G	T	E	H	V	A	L	E	I	S	F
Query Conservation																		.	.	.																																										.	.	.
Alig confidence																		.	.	.																																										.	.	.
Template Conservation
Template Sequence		L	A	T	T	L	E	R	I	E	K	N	F	V	I	T	D	P	R	L	P	D	N	P	I	I	F	A	S	D	S	F	L	Q	L	T	E	Y	S	R	E	E	I	L	G	R	N	C	R	F	L	Q	G	P	E	T	D	R	A	T	V	R	K	I	R	D	A	I	D	N	Q	T	E	V	T	V	Q	L	I	N	Y
Template Known Secondary structure					T	G	G	G	S	S	S							T	T	S	T	T																						T	T	S		G	G	G	G			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	R	D	R	T	I	E	L	S	V	T	T	S	R	I	H	N	T	H	G	E	M	I	G	A	L	V	I	F	S	D	L	T	A	R	K	E	T	Q	R	R	M	A	Q	A	E	R	L	A	T	L	G	E	L	M	A	G	V	A	H	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	S	G	K	K	F	W	N	L	F	H	L	Q	P	M	R	D	Q	K	G	D	V	Q	Y	F	I	G	V	Q	L	D	G	T	E	H	V	R	D	A	A	E	R	E	G	V	M	L	I	K	K	T	A	E	N	I	D	E	A	A	K	E	L
Template Known Secondary structure			T	T																T	T	S													S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions