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Job DescriptionQ06067
Confidence97.22%DateThu Jan 5 12:33:25 GMT 2012
Rank109Aligned Residues100
% Identity14%Templatec2pdtD_
PDB info PDB header:circadian clock proteinChain: D: PDB Molecule:vivid pas protein vvd; PDBTitle: 2.3 angstrom structure of phosphodiesterase treated vivid
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270......... 280.........290.........300.........310...... ...320.........330..
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Query Sequence  NAADGVIAID. . . RQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQF. . . . . . . . . . . . . . YSPVLDTLEHGTEHVA
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Template Sequence  DTSCALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAIDRNAEVQV
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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   333......340.........350.........360.........
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Query Sequence  LEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSD
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Template Sequence  EVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE
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   148.150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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