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Job Description | Q06067 | Confidence | 97.22% | Date | Thu Jan 5 12:33:25 GMT 2012 |
Rank | 109 | Aligned Residues | 100 |
% Identity | 14% | Template | c2pdtD_ |
PDB info |
PDB header:circadian clock protein | Chain: D: PDB Molecule:vivid pas protein vvd; |
PDBTitle: 2.3 angstrom structure of phosphodiesterase treated vivid
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Resolution | 2.20 Å |
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270 | . | . | . | . | . | . | . | . | . | |
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280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
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. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
N | A | A | D | G | V | I | A | I | D | . |
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R | Q | G | D | V | T | T | M | N | P | A | A | E | V | I | T | G | Y | Q | R | H | E | L | V | G | Q | P | Y | S | M | L | F | D | N | T | Q | F | . |
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Y | S | P | V | L | D | T | L | E | H | G | T | E | H | V | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | T | S | C | A | L | I | L | C | D | L | K | Q | K | D | T | P | I | V | Y | A | S | E | A | F | L | Y | M | T | G | Y | S | N | A | E | V | L | G | R | N | C | R | F | L | Q | S | P | D | G | M | V | K | P | K | S | T | R | K | Y | V | D | S | N | T | I | N | T | M | R | K | A | I | D | R | N | A | E | V | Q | V |
Template Known Secondary structure |   |
| T | T | S | S |  |  |  |  |  | T | T | S | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
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333 | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | E | I | S | F | P | G | R | D | R | T | I | E | L | S | V | T | T | S | R | I | H | N | T | H | G | E | M | I | G | A | L | V | I | F | S | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | V | N | F | K | K | N | G | Q | R | F | V | N | F | L | T | M | I | P | V | R | D | E | T | G | E | Y | R | Y | S | M | G | F | Q | C | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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