 |
Job Description | Q06067 | Confidence | 20.91% | Date | Thu Jan 5 12:33:25 GMT 2012 |
Rank | 154 | Aligned Residues | 66 |
% Identity | 12% | Template | c2kbiA_ |
PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:sodium channel protein type 5 subunit alpha; |
PDBTitle: solution nmr structure of the c-terminal ef-hand domain of2 human cardiac sodium channel nav1.5
|
Resolution | UNK |
|
 |
  |   |
538 | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | |
. | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | N | G | C | G | I | D | L | S | L | Q | K | K | I | F | D | P | F | F | T | T | K | A | S | G | T | G | . |
L | G | L | A | L | S | Q | R | I | I | N | A | H | Q | G | D | I | R | V | A | S | L | P | G | Y | G | A | T | F | T | L | I | L | P | I | N | P | Q | G |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
| . |
|
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |   | . |
|
|   |   |   |
|   |   |
|
|
|
|
|   |   |
|   |
Template Sequence |   |
E | E | S | T | E | P | L | S | E | D | D | F | D | M | F | Y | E | I | W | E | K | F | D | P | E | A | T | Q | F | I | E | Y | S | V | L | S | D | F | A | D | A | L | S | E | P | L | R | I | A | K | . |
P | N | Q | I | S | L | I | N | M | D | L | P | M | V | S | G | D |
Template Known Secondary structure |   |
|
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |
|
|
| S | . | S |
|  |  |  |  |  |  | S |
|
|
|
| S | S | S | S |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1780 | . | . | . | . | . | . | . | . | . | 1790 | . | . | . | . | . | . | . | . | . | 1800 | . | . | . | . | . | . | . | . | . | 1810 | . | . | . | . | . | . | . | . | . | 1820 | . | . | . | . | . | . | . | . | . | |
1830 | . | . | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|