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Job DescriptionQ06067
Confidence100.00%DateThu Jan 5 12:33:25 GMT 2012
Rank4Aligned Residues228
% Identity17%Templatec2bu8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   377..380.........390.........400.........410...... ...420.........430.........440........
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Query Sequence  QRRMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQ. . . . . . . . QTSDPIHQEYLSVVLKEIDSINKVIQQLLEFS
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Template Sequence  EFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF
Template Known Secondary structure  TTSS

TTSTTTTTTT


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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   449450..... ....460.........470........ .480....... ..490.........500.........510.
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Query Sequence  RPRHSQW. . . . . . . . . QQVSLNALVEETLVLVQTAGVQA. . . . . RVDFISELD. . . NELSPINADRELLKQVLLNILINA
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Template Sequence  DGSTNPAHPKHIGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNA
Template Known Secondary structure  SSS
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   512.. .....520.........530.........540.........550.........560.........570.........580....
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Query Sequence  VQA. . . . . . . ISARGKIRIQTWQYSDSQQAISIEDNGCGIDLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGDIRV
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Template Sequence  MRATVESHESSLILPPIKVMVALGEE. DLSIKMSDRGGGVPLRKIERLFSYMYSTPLAGFGYGLPISRLYAKYFQGDLQL
Template Known Secondary structure  TTTT
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   249250.........260.........270.... .....280.........290.........300.........310.........320.......
 
   585....590.........600.....
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Query Sequence  ASLPGYGATFTLILPINPQGN
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Template Sequence  FSMEGFGTDAVIYLKALSTDS
Template Known Secondary structure  TTSSTTT
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   339340.........350.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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