Job Description Q06067 Confidence 21.12% Date Thu Jan 5 12:33:25 GMT 2012 Rank 153 Aligned Residues 134 % Identity 10% Template c1yz6A_ PDB info PDB header:translation Chain: A: PDB Molecule:probable translation initiation factor 2 alpha PDBTitle: crystal structure of intact alpha subunit of aif2 from2 pyrococcus abyssi Resolution 3.37 Å

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		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	I	N	K	V	I	Q	Q	L	L	E	F	S	R	P	R	H	S	Q	W	Q	Q	V	S	L	N	A	L	V	E	E	T	L	V	L	V	Q	T	A	G	V	Q	A	R	V	D	F	I	S	E	L	D	N	E	L	S	P	I	N	A	D	R	E	L	L	K	Q	V	L	L	N	I	L	I	N	A	V	Q	A
Query Conservation
Alig confidence																																																					.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		E	E	W	G	E	V	Y	A	A	F	E	D	A	A	K	D	G	I	D	V	L	K	G	H	V	P	D	E	W	L	P	V	L	K	E	I	I	D	N	Y	V	E	V	P	T	V	T	I	D	A	E	.	.	.	.	.	F	E	I	T	V	P	K	P	N	G	V	E	I	I	K	E	A	L	I	R	A	R	D	R
Template Known Secondary structure				T	S														G	G	G	G	B	T	T	B		T	T	T												S											.	.	.	.	.							S	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	R	G	K	I	R	I	Q	T	W	Q	Y	S	D	S	Q	Q	A	I	S	I	E	D	N	G	C	G	I	D	L	S	L	Q	K	K	I	F	D	P	F	F	T	T	K	A	S	G	T	G	L	G	L	A	L	S	Q	R	I	I	N	A	H	Q	G	D	I	R	V	A	S	L	P
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	K	E	K	D	V	E	V	K	F	T	Y	L	G	A	P	R	Y	R	I	D	I	T	A	P	D	Y	Y	K	A	E	E	V	L	E	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	I	L	R	V	I	K	E	A	G	G	E	A	T	L	L	R	K	E
Template Known Secondary structure			T	T	S	S	S										T	T									S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T						S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.																.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions