Job Description Q06067 Confidence 97.80% Date Thu Jan 5 12:33:25 GMT 2012 Rank 77 Aligned Residues 70 % Identity 21% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		500	.	.	.	.	.	.	.	.	.	510	.	.	.				.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.									.	.	550	.	.	.	.	.	.	.											.
Predicted Secondary structure																.	.	.																																			.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																																			.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	Q	V	L	L	N	I	L	I	N	A	V	Q	.	.	.	A	I	S	A	R	G	K	I	R	I	Q	T	W	Q	Y	S	D	S	Q	Q	A	I	S	I	E	D	N	G	C	G	I	D	L	S	.	.	.	.	.	.	.	.	L	Q	K	K	I	F	D	P	F	F	.	.	.	.	.	.	.	.	.	.	T
Query Conservation																.	.	.																																			.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.													.						.	.															.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																															.						.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	.	H	A	E	E	H	.	.	T	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K
Template Known Secondary structure																					T	T									.		T	T	T	T	.	.								S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																															.						.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	S	G	T	G	L	G	L	A	L	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	G	R	N	G	Y	G	A	K	L	C	N
Template Known Secondary structure				S			S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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