Job Description Q06067 Confidence 100.00% Date Thu Jan 5 12:33:25 GMT 2012 Rank 7 Aligned Residues 227 % Identity 18% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		T	Q	R	R	M	A	Q	A	E	R	L	A	T	L	G	E	L	M	A	G	V	A	H	E	V	R	N	P	L	T	A	I	R	G	Y	V	Q	I	L	R	Q	Q	T	S	D	P	.	I	H	Q	E	Y	L	S	V	V	L	K	E	I	D	S	I	N	K	V	I	Q	Q	L	L	E	F	S	R	P	R	H	S	Q
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R	K	H	I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L	G	I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F
Template Known Secondary structure		T	S					S																		T	T	T													T	T	T	S	S																													T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		455					.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.				.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.									.	.	.	.
Predicted Secondary structure			.	.	.	.																								.	.	.																																						.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																								.	.	.																																						.	.	.	.	.	.	.	.
Query Sequence		W	.	.	.	.	Q	Q	V	S	L	N	A	L	V	E	E	T	L	V	L	V	Q	T	A	G	V	Q	A	.	.	.	R	V	D	F	I	S	E	L	D	N	E	L	S	P	I	N	A	D	R	E	L	L	K	Q	V	L	L	N	I	L	I	N	A	V	Q	A	I	.	.	.	.	.	.	.	.	S	A	R	G
Query Conservation			.	.	.	.																								.	.	.																																						.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.																								.	.	.													.																									.	.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H	V	A	A	.	R	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K	N	A	M	R	A	T	M	E	S	H	L	D	T	P	Y	N	V	P
Template Known Secondary structure			T	T																											S										S	T	T		.																											T		T	T		T	T	S
Template Predicted Secondary structure																																													.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	I	Q	T	W	Q	Y	S	D	S	Q	Q	A	I	S	I	E	D	N	G	C	G	I	D	L	S	L	Q	K	K	I	F	D	P	F	F	T	T	K	A	S	G	T	G	L	G	L	A	L	S	Q	R	I	I	N	A	H	Q	G	D	I	R	V	A	S	L	P	G	Y	G	A	T	F	T	L	I	L	P
Query Conservation
Alig confidence													.																														.	.
Template Conservation													.																														.	.
Template Sequence		D	V	V	I	T	I	A	N	N	D	V	.	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V	M	D	Y	H	F	T	T	A	.	.	G	F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R
Template Known Secondary structure											S	S	.										S					G	G	G	T	T	T	T	T	S	T	T					.	.			S														T									T	T	T
Template Predicted Secondary structure													.																														.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	P	Q	G	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	D	G	R	E	E
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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