|   |
455 | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | T | E | P | G | L | R | P | A | L | E | A | S | C | E | E | Y | S | A | K | F | G | F | P | V | K | L | D | Y | Q | L | P | P | R | L | V | P | S | H | Q | A | I | H | L | L | Q | I | A | R | E | A | L | S | N | A | L | K | H | S | Q | A | S | E | V | V | V | T | V | A | Q | N | D | N | Q | V | K | L | T | V |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
D | H | V | P | V | D | I | T | D | L | L | D | R | A | A | H | D | A | A | R | I | Y | P | D | L | . |
D | V | S | L | V | P | S | P | T | C | I | I | V | G | L | P | A | G | L | R | L | A | V | D | N | A | I | A | N | A | V | K | H | G | G | A | T | L | V | Q | L | S | A | V | S | S | R | A | G | V | E | I | A | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
| . |  |  |  |  |
| S |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | |
. | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
  |
  |   |
535 | . | . | . | . | 540 | . | . | . | . | . | . | . | |
|
|
|
. | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | N | G | C | G | V | P | E | N | A | I | R | . |
. |
. |
. |
S | N | H | Y | G | M | I | I | M | R | D | R | A | Q | S | L | R | G | D | C | R | V | R | R | R | E | S | G | G | T | E | V | V | V | T | F | I |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |
|   |   |   | . | . | . | . |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|
Template Sequence |   |
D | D | N | G | S | G | V | P | E | G | E | R | Q | V | V | F | E | R | F | S | L | G | L | A | L | V | A | Q | Q | A | Q | L | H | G | G | T | A | S | L | E | N | S | P | L | G | G | A | R | L | V | L | R | L | P |
Template Known Secondary structure |   |
 |  | S | S | S |
|
|
| G | G | G |  |  |  |  |  | T | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
379 | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . |
  |