Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFA2
Confidence99.88%DateThu Jan 5 11:25:43 GMT 2012
Rank14Aligned Residues129
% Identity19%Templated1ysra1
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine kinase
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   455....460.........470.........480.........490.........500.........510.........520.........530....
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  QLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTV
Query Conservation        
   
              
              
   
 


 


 



    
 
 
        
 
 
Alig confidence 
























.





















































Template Conservation 
  
 

   
              . 
         
  
   
  

 


 


       
            
 
Template Sequence  DHVPVDITDLLDRAAHDAARIYPDL. DVSLVPSPTCIIVGLPAGLRLAVDNAIANAVKHGGATLVQLSAVSSRAGVEIAI
Template Known Secondary structure 

STT
.
S




TT

STT
Template Predicted Secondary structure 









.














Template SS confidence 















































































   300.........310.........320.... .....330.........340.........350.........360.........370........
 
   535....540....... ..550.........560.........570.........580....
Predicted Secondary structure 







....











Query SS confidence 












. . . .




































Query Sequence  QDNGCGVPENAIR. . . . SNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFI
Query Conservation   


 

  
   ....





 

   
   

 
 
 
  
 

 
 
 

Alig confidence 












....




































Template Conservation   
 
 

        
  




 
   
    

 
 
 
    

   
 

Template Sequence  DDNGSGVPEGERQVVFERFSLGLALVAQQAQLHGGTASLENSPLGGARLVLRLP
Template Known Secondary structure  SSS


GGGTS




TT

TTSS
Template Predicted Secondary structure 


















Template SS confidence 





















































   379380.........390.........400.........410.........420.........430..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions