Job Description P0AFA2 Confidence 98.96% Date Thu Jan 5 11:25:43 GMT 2012 Rank 31 Aligned Residues 150 % Identity 12% Template d1ixma_ SCOP info Sporulation response regulatory protein Spo0B Sporulation response regulatory protein Spo0B Sporulation response regulatory protein Spo0B Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	M	E	E	R	A	T	I	A	R	E	L	H	D	S	I	A	Q	S	L	S	C	M	K	M	Q	V	S	C	L	Q	M	Q	G	D	A	L	P	E	S	S	R	E	L	L	S	Q	I	R	N	E	L	N	A	S	W	A	Q	L	R	E	L	L	T	T	F	R	L	Q	L	T	E	P	G	L	R	P	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	T	N	E	L	I	H	L	L	G	H	S	R	H	D	W	M	N	K	L	Q	L	I	K	G	N	L	S	L	.	.	.	.	.	.	Q	K	Y	D	R	V	F	E	M	I	E	E	M	V	I	D	A	K	H	E	S	K	L	S	N	.	.	.	.	.	.	.	.	.	.	.	.	L	K	T	P	H	L
Template Known Secondary structure																																T	.	.	.	.	.	.	T																								T	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.						.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		L	E	A	S	C	E	E	Y	S	A	K	F	G	F	P	V	K	L	D	Y	Q	L	P	P	R	L	V	P	S	H	Q	A	I	H	L	L	Q	I	A	R	E	A	L	S	N	A	L	K	H	S	Q	A	S	E	.	.	.	.	.	V	V	V	T	V	A	Q	N	D	N	Q	V	K	L	T	V	Q	D	N	G	C
Query Conservation																																																								.	.	.	.	.
Alig confidence																													.																											.	.	.	.	.
Template Conservation																													.
Template Sequence		A	F	D	F	L	T	F	N	W	K	T	H	Y	M	T	L	E	Y	E	V	L	G	E	I	K	D	L	.	S	A	Y	D	Q	K	L	A	K	L	M	R	K	L	F	H	L	F	D	Q	A	V	S	R	E	S	E	N	H	L	T	V	S	L	Q	T	D	H	P	D	R	Q	L	I	L	Y	L	D	F	H	G	A
Template Known Secondary structure								G	G	G	S			S	S								S	S					.	T	T	T																			B		T	T	S													S	S	S	S									S
Template Predicted Secondary structure																													.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		540	.	.	.	.	.	.	.												.	.	550	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	P	E	N	A	I	R	.	.	.	.	.	.	.	.	.	.	.	S	N	H	Y	G	M
Query Conservation										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	D	P	S	A	F	D	I	M	R	F	E	I	T	S	H	E	C	L	I	E	I	G	L
Template Known Secondary structure		B	S		G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions