 |
Job Description | P0AFA2 | Confidence | 16.83% | Date | Thu Jan 5 11:25:43 GMT 2012 |
Rank | 98 | Aligned Residues | 56 |
% Identity | 18% | Template | c3bjeA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nucleoside phosphorylase, putative; |
PDBTitle: crystal structure of trypanosoma brucei nucleoside phosphorylase shows2 uridine phosphorylase activity
|
Resolution | 1.44 Å |
|
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | |
|
. | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | P | P | R | L | V | P | S | H | Q | A | I | H | L | L | Q | I | A | R | E | A | L | S | N | A | L | K | H | S | . |
. |
Q | A | S | E | V | V | V | T | V | A | Q | N | D | N | Q | V | K | L | T | V | Q | D | N | G | C | G | V | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |   | . | . |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|
| . | . |   |   |
|
|
|   |
|
|
|
|
|   |
|
Template Sequence |   |
E | L | A | D | R | I | I | F | V | G | D | P | G | R | V | D | V | I | S | G | Y | F | D | K | D | S | I | R | A | S | R | D | H | R | E | I | R | F | A | T | G | T | Y | K | G | . |
. |
T | P | V | T | V | I | S | T | G | M | G | V | D |
Template Known Secondary structure |   |
G |
|
| S |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  | T | T | S |
| T | T |
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | . | . |  |  |  |  |  |  |  |
|
| S | S |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|