Job Description P0AFA2 Confidence 99.37% Date Thu Jan 5 11:25:43 GMT 2012 Rank 27 Aligned Residues 97 % Identity 20% Template c2zbkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

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		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.							.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.																			.	.
Predicted Secondary structure																								.	.	.	.	.	.									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Query SS confidence																								.	.	.	.	.	.									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Query Sequence		A	I	H	L	L	Q	I	A	R	E	A	L	S	N	A	L	K	H	S	Q	A	S	.	.	.	.	.	.	E	V	V	V	T	V	A	Q	.	N	D	N	Q	V	K	L	T	V	Q	D	N	G	C	G	V	P	E	N	A	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	.
Query Conservation																								.	.	.	.	.	.									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Alig confidence																								.	.	.	.	.	.									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation
Template Sequence		A	R	A	L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T	R	G	M	Y
Template Known Secondary structure																		T	T	T	T	T	T	T														T	T	T	T										S					G	G	G	S					T	S				S						S			S		S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.		.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure																			.								.
Query SS confidence																			.								.
Query Sequence		H	Y	G	M	I	I	M	R	D	R	A	Q	S	L	R	G	D	.	C	R	V	R	R	R	E	.	S	G	G	T	E	V	V	V	T	F	I	P	E	K	T	F	T	D	V
Query Conservation																			.								.
Alig confidence																			.								.
Template Conservation
Template Sequence		G	L	G	V	K	A	A	V	L	Y	S	Q	M	H	Q	D	K	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L	K	I	D	I	N	K	N	E	P
Template Known Secondary structure		S	S																								T	T		S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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