Job Description P0AFA2 Confidence 99.96% Date Thu Jan 5 11:25:43 GMT 2012 Rank 1 Aligned Residues 211 % Identity 19% Template c2c2aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor histidine kinase; PDBTitle: structure of the entire cytoplasmic portion of a sensor2 histidine kinase protein Resolution 1.9 Å

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		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																																										.																																					.	.	.
Query SS confidence																																										.																																					.	.	.
Query Sequence		R	H	Q	E	R	Q	Q	Q	L	I	V	M	E	E	R	A	T	I	A	R	E	L	H	D	S	I	A	Q	S	L	S	C	M	K	M	Q	V	S	C	L	.	Q	M	Q	G	D	A	L	P	E	S	S	R	E	L	L	S	Q	I	R	N	E	L	N	A	S	W	A	Q	L	R	E	L	L	T	T	F	.	.	.
Query Conservation																																										.																																					.	.	.
Alig confidence																																										.																																					.	.	.
Template Conservation
Template Sequence		E	S	K	E	L	E	R	L	K	R	I	D	R	M	K	T	E	F	I	A	N	I	S	H	E	L	R	T	P	L	T	A	I	K	A	Y	A	E	T	I	Y	N	S	L	G	E	L	D	L	S	T	L	K	E	F	L	E	V	I	I	D	Q	S	N	H	L	E	N	L	L	N	E	L	L	D	F	S	R	L	E
Template Known Secondary structure																											T																	T	G	G	G			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
						453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.					.	.	520	.
Predicted Secondary structure		.	.	.	.																									.	.	.																																										.	.	.	.
Query SS confidence		.	.	.	.																									.	.	.																																										.	.	.	.
Query Sequence		.	.	.	.	R	L	Q	L	T	E	P	G	L	R	P	A	L	E	A	S	C	E	E	Y	S	A	K	F	.	.	.	G	F	P	V	K	L	D	Y	Q	L	P	P	R	L	V	P	S	H	Q	A	I	H	L	L	Q	I	A	R	E	A	L	S	N	A	L	K	H	S	Q	A	S	.	.	.	.	E	V	V	V
Query Conservation		.	.	.	.																									.	.	.																																										.	.	.	.
Alig confidence		.	.	.	.																									.	.	.																																										.	.	.	.
Template Conservation
Template Sequence		R	K	S	L	Q	I	N	R	E	K	V	D	L	C	D	L	V	E	S	A	V	N	A	I	K	E	F	A	S	S	H	N	V	N	V	L	F	E	S	N	V	P	C	P	V	E	A	Y	I	D	P	T	R	I	R	Q	V	L	L	N	L	L	N	N	G	V	K	Y	S	K	K	D	A	P	D	K	Y	V	K	V
Template Known Secondary structure			T																													T	T								S	S		S																									T			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.										.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		T	V	A	Q	N	D	N	Q	V	K	L	T	V	Q	D	N	G	C	G	V	P	E	N	A	I	R	.	.	.	.	.	.	.	.	.	S	N	H	Y	G	M	I	I	M	R	D	R	A	Q	S	L	R	G	D	C	R	V	R	R	R	E	S	G	G	T	E	V	V	V	T	F	I	P	E	K
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	D	E	K	D	G	G	V	L	I	I	V	E	D	N	G	I	G	I	P	D	H	A	K	D	R	I	F	E	Q	F	Y	R	V	D	T	G	L	G	L	A	I	T	K	E	I	V	E	L	H	G	G	R	I	W	V	E	S	E	V	G	K	G	S	R	F	F	V	W	I	P	K	D	R
Template Known Secondary structure							T	T										S	S				G	G	G	T	T	G	G	G	S	T	T								T											T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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