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Job Description | P0AFA2 | Confidence | 97.99% | Date | Thu Jan 5 11:25:43 GMT 2012 |
Rank | 43 | Aligned Residues | 56 |
% Identity | 29% | Template | c1kijB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:dna gyrase subunit b; |
PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin
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Resolution | 2.30 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | L | Q | I | A | R | E | A | L | S | N | A | L | K | H | S | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | H | H | L | F | K | E | I | L | D | N | A | V | D | E | A | L | A | G | Y | A | T | E | I | L | V | R | L | N | E | D | G | S | . |
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L | T | V | E | D | N | G | R | G | I | P | V | D | L | M | P | E | E | G | K | P | A | V | E | V | I | Y | N | T | L | H | S | G | G | K | F | E | Q | G | A | Y | K | V | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
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548 | . | 550 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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S | N | H | Y | G | M | I | I | M | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | G | L | H | G | V | G | A | S | V | V | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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112 | . | . | . | . | . | . | . | 120 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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