Job Description P0AFA2 Confidence 99.95% Date Thu Jan 5 11:25:43 GMT 2012 Rank 3 Aligned Residues 215 % Identity 15% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		R	H	Q	E	R	Q	Q	Q	L	I	V	M	E	E	R	A	T	I	A	R	E	L	H	D	S	I	A	Q	S	L	S	C	M	K	M	Q	V	S	C	L	Q	M	Q	G	.	.	D	A	L	P	E	S	S	R	E	L	L	S	Q	I	R	N	E	L	N	A	S	W	A	Q	L	R	E	L	L	T	T	F	R	L
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		Q	K	L	T	D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R	K	H	I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L	G	I	R	M	L	A	T	H	H	L	A	L	H	E	D
Template Known Secondary structure						T	S					S																		T	T	T													T	T	T	S	S																													T	T	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		455	.								.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.					.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.										.
Predicted Secondary structure				.	.	.	.	.	.	.																		.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.																		.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	.	.	.	.	.	.	.	T	E	P	G	L	R	P	A	L	E	A	S	C	E	E	Y	S	.	.	.	.	A	K	F	G	F	P	V	K	L	D	Y	Q	L	P	P	R	L	V	P	S	H	Q	A	I	H	L	L	Q	I	A	R	E	A	L	S	N	A	L	K	H	.	.	.	.	.	.	.	.	.	S
Query Conservation				.	.	.	.	.	.	.																		.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																		.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H	V	A	A	R	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K	N	A	M	R	A	T	M	E	S	H	L	D	T	P	Y
Template Known Secondary structure			T	T			T	T																											S										S	T	T																												T		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.											.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	S	E	V	V	V	T	V	A	Q	N	D	N	Q	V	K	L	T	V	Q	D	N	G	C	G	V	P	E	N	A	I	.	.	.	.	.	.	.	.	.	.	R	S	N	H	Y	G	M	I	I	M	R	D	R	A	Q	S	L	R	G	D	C	R	V	R	R	R	E	S	G	G	T	E	V	V	V	T	F	I
Query Conservation																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	P	D	V	V	I	T	I	A	N	N	D	V	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V	M	D	Y	H	F	T	T	A	G	F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R
Template Known Secondary structure		S												S	S										S					G	G	G	T	T	T	T	T	S	T	T							S														T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		585	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	K	T	F	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	D	G	R	E	E
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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