Return to main results Retrieve Phyre Job Id

Job DescriptionP25888
Confidence98.43%DateThu Jan 5 11:42:41 GMT 2012
Rank134Aligned Residues159
% Identity14%Templated1z63a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30...... ...40.........50.........60.........70.........80.........90........
Predicted Secondary structure 


....



















Query SS confidence 













. . . .





























































Query Sequence  EPTPIQQQAIPAVL. . . . EGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY
Query Conservation   
  

  

  

.... 
   

 








   



  
               


 

 


 
        
Alig confidence 













....
































.......






.













Template Conservation   
   
   
           
 



  




         
       .......  


 
.  
   
  
    
Template Sequence  NLRPYQIKGFSWXRFXNKLGFGICLADDXGLGKTLQTIAVFSDAKKENELT. . . . . . . PSLVICP. LSVLKNWEEELSKF
Template Known Secondary structure 


TT




TTS
TT

S.......S
.STT
Template Predicted Secondary structure 
















.......

.
Template SS confidence 















































































   443......450.........460.........470.........480.........490... ......500 .........510....
 
   99100.........110.........120.........130.........140.........150.........160.........170........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  SKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP
Query Conservation                               
 
                   
   
 

            
        
Alig confidence 















.......






















...






















...




Template Conservation                  .......      


              ...      
 

        
    ...     
Template Sequence  APHLRFAVFHEDRSKI. . . . . . . KLEDYDIILTTYAVLLRDTRLKE. . . VEWKYIVIDEAQNIKNPQTKIFK. . . AVKEL
Template Known Secondary structure 
TTS

SSSTTS
.......
GGGSSTT
T...

TGGGGS
TTS...TS
Template Predicted Secondary structure 










.......






...










...
Template SS confidence 















































































   515....520.........530 .........540.........550... ......560.........570...... ...580.
 
   179180.........190.........200..
Predicted Secondary structure 








Query SS confidence 























Query Sequence  AKRQNLLFSATFSDDIKALAEKLL
Query Conservation           

            
Alig confidence 























Template Conservation      
  

 

  
    
  

Template Sequence  KSKYRIALTGTPIENKVDDLWSIX
Template Known Secondary structure 

SS
STT
Template Predicted Secondary structure 










Template SS confidence 























   582.......590.........600.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions