Return to main results Retrieve Phyre Job Id

Job DescriptionP25888
Confidence100.00%DateThu Jan 5 11:42:41 GMT 2012
Rank60Aligned Residues191
% Identity39%Templated1qdea_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALI
Query Conservation    
  
 
   
   
   
   
  

  

  

 
   

 








   



  
               

Alig confidence 
































































......








Template Conservation    
  
 
   
   
   
      

   
  

 
 



 








   

 
     ......         
Template Sequence  YKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDT. . . . . . SVKAPQALM
Template Known Secondary structure 

GGGGT

T

S

TT



TTSS

T......T

S

Template Predicted Secondary structure 























......








Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80..... ....90....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
Query Conservation 
 

 


 
                                     
 
                   
   
 

   
Alig confidence 






























...........





































Template Conservation           
                     ...........         
   
                




 
 
Template Sequence  LAPTRELALQIQKVVMALAFHMDIKVHACIG. . . . . . . . . . . LRDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADE
Template Known Secondary structure 
SSTTTS




...........
TT
S
TTSS

TT

T
Template Predicted Secondary structure 







...........

















Template SS confidence 















































































   95....100.........110.........120..... ....130.........140.........150.........160...
 
   161........170.........180.........190.........200........
Predicted Secondary structure 




















Query SS confidence 















































Query Sequence  MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEI
Query Conservation           
                 

            
      
Alig confidence 















































Template Conservation           
  

  
    
 
  



   
       
  

 
Template Sequence  MLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRI
Template Known Secondary structure  TT
S
TT
SS


SS
Template Predicted Secondary structure 


















Template SS confidence 















































   174.....180.........190.........200.........210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions