 |
Job Description | P25888 | Confidence | 99.64% | Date | Thu Jan 5 11:42:41 GMT 2012 |
Rank | 121 | Aligned Residues | 105 |
% Identity | 23% | Template | d1jr6a_ |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RNA helicase
|
Resolution | UNK |
|
 |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | K | G | N | W | Q | Q | V | L | V | F | T | R | T | K | H | G | A | N | H | L | A | E | Q | L | N | K | D | G | I | R | S | A | A | I | H | G | N | K | S | Q | G | A | R | T | R | A | L | A | D | F | K | S | G | D | I | R | V | L | V | A | T | D | I | A | A | R | G | L | D | I | E | E | L | P | H | V | V | N |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |
|
|
|   |   |   |   |   |
|
|   |   |
Template Sequence |   |
L | E | V | I | K | G | G | R | H | L | I | F | C | H | S | K | K | K | C | D | E | L | A | A | K | L | V | A | L | G | I | N | A | V | A | Y | Y | R | G | L | D | V | . |
. |
. |
. |
. |
. |
. |
S | V | I | P | T | N | G | D | V | V | V | V | A | T | D | A | L | M | T | G | F | T | G | D | F | D | S | V | I | D | C |
Template Known Secondary structure |   |
 |  |  |  | T | T | S |
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| T | T |
|
| S | . | . | . | . | . | . | . |
|
|
| T | T | S | S |
|  |  |  |  |  | S | S | S | S |
| S | S | S |
|
|
| B | S |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
|
|
|
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
Predicted Secondary structure |   |
. | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
Y | E | L | P | N | V | P | E | D | Y | V | H | R | I | G | R | T | G | R | A | A | A | T | G | E | A | L | S | L | V | C | V | D |
Query Conservation |   |
. | . | . |   |
|   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
| . |   |   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
N | T | S | D | G | K | P | Q | D | A | V | S | R | T | Q | R | R | G | R | T | G | R | . |
G | K | P | G | I | Y | R | F | V | A | P | G | E |
Template Known Secondary structure |   |
S |  |  | T | T |  |  |
|
|  |  |  |  |  |  |  |  | T | T | B |
| S | . | S | S |
|  |  |  |  |  |
|
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|