Job Description P25888 Confidence 100.00% Date Thu Jan 5 11:42:41 GMT 2012 Rank 30 Aligned Residues 321 % Identity 19% Template c3rc8A_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase supv3l1, mitochondrial; PDBTitle: human mitochondrial helicase suv3 in complex with short rna fragment Resolution 2.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	I	Q	Q	Q	A	I	P	A	V	L	E	G	R	D	L	M	A	S	A	Q	T	G	T	G	K	T	A	G	F	T	L	P	L	L	Q	H	L	I	T	R	Q	P	H	A	K	G	R	R	P	V	R	A	L	I	L	T	P	T	R	E	L	A	A	Q	I	G	E	N	V	R	D	Y	S	K	Y	L	N	I
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	P	N	W	Y	P	D	A	R	A	M	Q	R	K	I	I	F	H	S	G	P	T	N	S	G	K	T	Y	H	A	I	Q	K	Y	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	S	G	V	Y	C	G	P	L	K	L	L	A	H	E	I	F	E	K	S	N	A	A	G	V	P	C	D	L
Template Known Secondary structure			G	G	G	G						T	S										S	S	S	S	S	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S						S	S														T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.														.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	V	V	F	G	G	V	S	I	N	P	Q	M	M	K	L	R	G	G	V	D	V	L	V	A	T	P	G	R	L	L	D	L	E	H	Q	N	A	V	K	L	D	Q	V	E	I	L	V	L	D	E	A	D	R	M	L	D	M	G	F	I	H	D	I	R	R	V	L	T	K	L	P	A	K	R	Q	N	L
Query Conservation
Alig confidence														.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Sequence		V	T	G	E	E	R	V	T	V	Q	P	N	.	.	.	.	.	.	G	K	Q	A	S	H	V	S	C	T	V	E	M	C	.	.	.	.	.	.	.	.	S	V	T	T	P	Y	E	V	A	V	I	D	E	I	Q	M	I	R	D	P	A	R	G	W	A	W	T	R	A	L	L	G	L	C	A	E	E	V	H	L
Template Known Secondary structure				S	S						S	S	S	.	.	.	.	.	.	S				S						G	G	G		.	.	.	.	.	.	.	.		S	S	S										G	G	G	G	G		T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.									280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	A	T	F	S	D	D	I	K	A	L	A	E	K	L	L	H	N	P	L	E	I	E	V	A	R	R	N	T	A	S	D	Q	V	T	Q	H	V	H	F	V	D	K	K	R	K	R	E	L	L	S	H	M	I	G	K	G	N	W	Q	Q	V	L	V	F	T	R	T	K	H	G	A	N	H	L	A	E	Q
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	G	E	P	A	A	I	D	L	V	M	E	L	M	Y	T	T	G	E	E	V	E	V	R	D	Y	K	R	L	T	P	I	S	V	L	D	H	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	L	D	N	L	R	P	G	D	C	I	V	C	F	S	K	N	D	I	Y	S	V	S	R	Q
Template Known Secondary structure					G	G	G												T											S	S						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T			T	T						S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																																.	.	.
Query SS confidence																													.	.																																.	.	.
Query Sequence		L	N	K	D	G	I	R	S	A	A	I	H	G	N	K	S	Q	G	A	R	T	R	A	L	A	D	F	.	.	K	S	G	D	I	R	V	L	V	A	T	D	I	A	A	R	G	L	D	I	E	E	L	P	H	V	V	N	Y	E	L	.	.	.	P	N	V	P	E	D	Y	V	H	R	I	G	R	T	G	R	A
Query Conservation																													.	.																																.	.	.
Alig confidence																													.	.																						.										.	.	.
Template Conservation																																																				.
Template Sequence		I	E	I	R	G	L	E	S	A	V	I	Y	G	S	L	P	P	G	T	K	L	A	Q	A	K	K	F	N	D	P	N	D	P	C	K	I	L	V	A	T	D	A	I	G	M	G	L	N	L	S	.	I	R	R	I	I	F	Y	S	L	I	K	E	P	I	T	T	S	Q	A	L	Q	I	A	G	R	A	G	R	F
Template Known Secondary structure					T	T								T	T	S															T	T		S								G	G	G	G	S	S					.	B	S					S		S	B			B											T	T	B
Template Predicted Secondary structure																																																				.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		A	.	.	.	A	T	G	E	A	L	S	L	V	C	V	D	E	H	K	L	L	R	D	I	E	K	L	L	K	K	E	I	P	R	I	A	I	P	G	Y	E	P	D	P	S	I	K	A	E	P	I	Q	N
Query Conservation			.	.	.
Alig confidence			.	.	.										.
Template Conservation															.
Template Sequence		S	S	R	F	K	E	G	E	V	T	T	M	N	.	H	E	D	L	S	L	L	K	E	I	L	K	R	P	V	D	P	I	R	A	A	G	L	H	P	T	A	E	Q	I	E	M	F	A	Y	H	L	P	D
Template Known Secondary structure		T	T	T			S						S	S	.												T	S																									T	T
Template Predicted Secondary structure															.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions