Job Description P25888 Confidence 95.07% Date Thu Jan 5 11:42:41 GMT 2012 Rank 167 Aligned Residues 85 % Identity 26% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	A	S	A	Q	T	G	T	G	K	T	A	G	F	T	L	P	L	L	Q	H	L	I	T	R	Q	P	H	A	K	G	R	R	P	V	R	A	L	I	L	T	P	T	R	E	L	A	A	Q	I	G	E	N	V	R	D	Y	S	K	Y	L	N	I	R	S	L	V	V	F	G	G	V	S	I	N	P	Q	M	M
Query Conservation
Alig confidence																.																.	.	.	.	.	.	.														.	.
Template Conservation																.																.	.	.	.	.	.	.														.	.
Template Sequence		I	M	F	V	G	F	N	G	S	G	K	T	T	T	.	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	.	.	.	.	.	.	.	V	I	A	A	S	D	T	F	R	A	G	A	I	.	.	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y
Template Known Secondary structure								T	T	S	S					.											T	T				.	.	.	.	.	.	.							T	T						.	.										T	T							S	T	T
Template Predicted Secondary structure																.																.	.	.	.	.	.	.														.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
								121	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	K	L	R	G	G	V	D	V	L	V	A	T	P	G	R
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R
Template Known Secondary structure											T		S								S	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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