Job Description P25888 Confidence 88.67% Date Thu Jan 5 11:42:41 GMT 2012 Rank 273 Aligned Residues 41 % Identity 24% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.															20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	F	D	S	L	G	L	S	P	D	I	L	R	A	V	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	R	E	P	T	P	I	Q	Q	Q	A	I	P	A	V	L	E	G	R	D	L	M	A	S	A	Q	T	G	T	G	K	T	A	G	F
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	W	E	D	I	G	G	L	E	D	V	K	R	E	L	Q	E	L	V	Q	Y	P	V	E	H	P	D	K	F	L	K	F	G	M	T	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	V	L	F	Y	G	P	P	G	C	G	K	T	L	L	A
Template Known Secondary structure				T	T	T	T		S																								T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.															.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions