Return to main results Retrieve Phyre Job Id

Job DescriptionP25888
Confidence91.73%DateThu Jan 5 11:42:41 GMT 2012
Rank218Aligned Residues42
% Identity31%Templatec3b9pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10........ .20.........30.........40.........50.....
Predicted Secondary structure 





............
















Query SS confidence 

















. . . . . . . . . . . .




































Query Sequence  MSFDSLGLSPDILRAVAE. . . . . . . . . . . . QGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGF
Query Conservation    
  
 
   
   
  ............ 
   
  

  

  

 
   

 








  
Alig confidence 

















............






.............
















Template Conservation      

 
    
  
   
                 .............  


 







 

Template Sequence  VEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPA. . . . . . . . . . . . . KGLLLFGPPGNGKTLLA
Template Known Secondary structure 

GGGS


T
GGGS
GGG


.............SSSSSS
Template Predicted Secondary structure 










.............






Template SS confidence 


































































   480.........490.........500.........510...... ...520.........530...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions