 |
Job Description | P25888 | Confidence | 87.98% | Date | Thu Jan 5 11:42:41 GMT 2012 |
Rank | 286 | Aligned Residues | 52 |
% Identity | 27% | Template | c3b6vA_ |
PDB info |
PDB header:motor protein | Chain: A: PDB Molecule:kinesin-like protein kif3c; |
PDBTitle: crystal structure of the motor domain of human kinesin family member2 3c in complex with adp
|
Resolution | 2.70 Å |
|
 |
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | A | I | P | A | V | L | E | G | R | D | . |
. |
L | M | A | S | A | Q | T | G | T | G | K | T | A | G | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | L | P | L | L | Q | H | L | I | T | R | Q | P | H | A | K | G | R | R | P | V | R | A | L | I |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |
|   |   | . | . |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
R | P | L | I | D | S | V | L | Q | G | F | N | G | T | V | F | A | Y | G | Q | T | G | T | G | K | T | Y | T | M | Q | G | T | W | V | E | P | E | L | R | G | V | I | P | N | A | F | E | H | I | F | T | H | I | S | R | S | Q | N | Q | Q | Y | L | V | R | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  | T |
| S | S |
| S | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|