Job Description P25888 Confidence 100.00% Date Thu Jan 5 11:42:41 GMT 2012 Rank 47 Aligned Residues 206 % Identity 39% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	S	L	G	L	S	P	D	I	L	R	A	V	A	E	Q	G	Y	R	E	P	T	P	I	Q	Q	Q	A	I	P	A	V	L	E	G	R	D	L	M	A	S	A	Q	T	G	T	G	K	T	A	G	F	T	L	P	L	L	Q	H	L	I	T	R	Q	P	H	A	K	G	R	R	P	V	R	A	L	I	L
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		R	F	S	D	F	P	L	S	K	K	T	L	K	G	L	Q	E	A	Q	Y	R	L	V	T	E	I	Q	K	Q	T	I	G	L	A	L	Q	G	K	D	V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P	V	L	E	A	L	Y	R	L	Q	W	T	.	.	S	T	D	G	L	G	V	L	I	I
Template Known Secondary structure		B	G	G	G	S													T	T			B														T	T									T	T	S																	T	T			.	.	G	G	G
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		T	P	T	R	E	L	A	A	Q	I	G	E	N	V	R	D	Y	S	K	Y	L	N	I	R	S	L	V	V	F	G	G	V	S	I	N	P	Q	M	M	K	L	R	G	G	V	D	V	L	V	A	T	P	G	R	L	L	D	L	E	H	Q	N	A	.	V	K	L	D	Q	V	E	I	L	V	L	D	E	A	D	R
Query Conservation																																																																	.
Alig confidence																																							.	.	.																								.
Template Conservation																																							.	.	.
Template Sequence		S	P	T	R	E	L	A	Y	Q	T	F	E	V	L	R	K	V	G	K	N	H	D	F	S	A	G	L	I	I	G	G	L	K	H	E	A	E	.	.	.	R	I	N	N	I	N	I	L	V	C	T	P	G	R	L	L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L	D	E	A	D	R
Template Known Secondary structure			S	S															T	T	T	S	S																.	.	.			T	T		S																	S	S				T	T							T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	D	M	G	F	I	H	D	I	R	R	V	L	T	K	L	P	A	K	R	Q	N	L	L	F	S	A	T	F	S	D	D	I	K	A	L	A	E	K	L	L	H	N	P	L	E	I	E	V	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	D	M	G	F	A	D	T	M	N	A	V	I	E	N	L	P	K	K	R	Q	T	L	L	F	S	A	T	Q	T	K	S	V	K	D	L	A	R	L	S	L	K	N	P	E	Y	V	W	V	H	E
Template Known Secondary structure					T	T	T										T	S		T	T	S							S	S												S		S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions