Job Description P25888 Confidence 99.92% Date Thu Jan 5 11:42:41 GMT 2012 Rank 85 Aligned Residues 150 % Identity 38% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	T	Q	H	V	H	F	V	D	K	K	R	K	R	E	L	L	S	H	M	I	G	K	G	N	W	Q	Q	V	L	V	F	T	R	T	K	H	G	A	N	H	L	A	E	Q	L	N	K	D	G	I	R	S	A	A	I	H	G	N	K	S	Q	G	A	R	T	R	A	L	A	D	F	K	S	G	D	I	R	V
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		D	V	I	Q	E	V	E	Y	V	K	E	E	A	K	M	V	Y	L	L	E	C	L	Q	K	T	P	P	.	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V
Template Known Secondary structure			S									G	G	G										T	T	S		S	.							S																T								T	T	S															T	S		S
Template Predicted Secondary structure																													.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		L	V	A	T	D	I	A	A	R	G	L	D	I	E	E	L	P	H	V	V	N	Y	E	L	P	N	V	P	E	D	Y	V	H	R	I	G	R	T	G	R	A	A	A	T	G	E	A	L	S	L	V	C	V	D	.	E	H	K	L	L	R	D	I	E	K	L	L	K	K	E	I	P	R	I	A
Query Conservation																																																								.
Alig confidence																																											.	.	.											.
Template Conservation																																											.	.	.
Template Sequence		L	V	A	T	D	V	A	S	K	G	L	D	F	P	A	I	Q	H	V	I	N	Y	D	M	P	E	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	T	.	.	.	G	I	A	T	T	F	I	N	K	A	C	D	E	S	V	L	M	D	L	K	A	L	L	L	E	A	K	Q	K	V	P
Template Known Secondary structure										T	T							S					S	S			S	S									T	T	S				.	.	.									T	T	S															T	T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.				.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions