Job Description P25888 Confidence 100.00% Date Thu Jan 5 11:42:41 GMT 2012 Rank 31 Aligned Residues 309 % Identity 16% Template c2ocaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent dna helicase uvsw; PDBTitle: the crystal structure of t4 uvsw Resolution 2.70 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	T	P	I	Q	Q	Q	A	I	P	A	V	L	E	G	R	D	L	M	A	S	A	Q	T	G	T	G	K	T	A	G	F	T	L	P	L	L	Q	H	L	I	T	R	Q	P	H	A	K	G	R	R	P	V	R	A	L	I	L	T	P	T	R	E	L	A	A	Q	I	G	E	N	V	R	D	Y	S	K	Y	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		E	P	H	W	Y	Q	K	D	A	V	F	E	G	L	V	N	R	R	R	I	L	N	L	P	T	S	A	G	R	S	L	I	Q	A	L	L	A	R	Y	Y	L	.	.	.	.	.	.	.	.	E	N	Y	E	G	K	I	L	I	I	V	P	T	T	A	L	T	T	Q	M	A	D	D	F	V	D	Y	R	L	F	S
Template Known Secondary structure																		S								S	T	T	T														.	.	.	.	.	.	.	.				S	S							S	S														T	T	S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	R	S	L	V	V	F	G	G	V	S	I	N	P	Q	M	M	K	L	R	G	G	V	D	V	L	V	A	T	P	G	R	L	L	D	L	E	H	Q	N	A	V	K	L	D	Q	V	E	I	L	V	L	D	E	A	D	R	M	L	D	M	G	F	I	H	D	I	R	R	V	L	T	K	L	P	A	K	R	Q
Query Conservation
Alig confidence															.	.	.																									.	.	.																			.	.	.	.
Template Conservation															.	.	.																									.	.	.																			.	.	.	.
Template Sequence		H	A	M	I	K	K	I	G	G	G	A	S	K	.	.	.	D	D	K	Y	K	N	D	A	P	V	V	V	G	T	W	Q	T	V	V	K	Q	P	K	E	.	.	.	W	F	S	Q	F	G	M	M	M	N	D	E	C	H	L	A	T	G	.	.	.	.	K	S	I	S	S	I	I	S	G	L	N	N	C	M	F
Template Known Secondary structure		G	G	G					G	G	G			T	.	.	.	T	G	G	G		T	T		S										T	T	S		G	G	.	.	.	G	G	G	G								T	G	G	G				.	.	.	.							G	G	G		T	T
Template Predicted Secondary structure															.	.	.																									.	.	.																			.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																						.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	L	F	S	A	T	F	S	D	D	I	K	A	L	A	E	K	L	L	H	N	P	L	E	I	E	V	A	R	R	N	T	A	S	D	Q	V	T	Q	H	V	H	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	K	R	K	R	E	L	L	S	H	M	I	G
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	G	L	S	G	S	L	R	D	G	K	A	N	I	M	Q	Y	V	G	M	F	G	E	I	F	K	P	V	T	T	S	E	L	K	I	N	S	I	F	L	R	Y	P	D	E	F	T	T	K	L	K	G	K	T	Y	Q	E	E	I	K	I	I	T	G	L	S	K	R	N	K	W	I	A	K	L	A	I	K	L
Template Known Secondary structure							S		G	G	G		S	S											S																												T	T												T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		K	G	N	W	Q	Q	V	L	V	F	T	R	T	K	H	G	A	N	H	L	A	E	Q	L	N	K	D	G	I	R	S	A	A	I	H	G	N	K	S	Q	G	A	R	T	R	A	L	A	D	F	K	S	G	D	I	R	.	V	L	V	A	T	D	I	A	A	R	G	L	D	I	E	E	L	P	H	V	V	N	Y
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		A	Q	K	D	E	N	A	F	V	M	F	K	H	V	S	H	G	K	A	I	F	D	L	I	K	N	E	Y	D	K	V	Y	Y	V	S	G	E	V	D	T	E	T	R	N	I	M	K	T	L	A	E	N	G	K	G	I	I	I	V	A	S	Y	G	V	F	S	T	G	I	S	V	K	N	L	H	H	V	V	L	A
Template Known Secondary structure			T	T	T								S	S													T	T		S	S					S	S	S	T	T																S													S					S							S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	N	V	P	E	D	Y	V	H	R	I	G	R	T	G	R	A	A	A	T	G	E	A	L	S	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	V	K	S	K	I	I	V	L	Q	T	I	G	R	V	L	R	K	H	G	S	K	T	I	A	T	V	W
Template Known Secondary structure		S				S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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