 |
Job Description | P25888 | Confidence | 95.32% | Date | Thu Jan 5 11:42:41 GMT 2012 |
Rank | 164 | Aligned Residues | 51 |
% Identity | 29% | Template | c2gzaB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:type iv secretion system protein virb11; |
PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate
|
Resolution | 2.60 Å |
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | Q | Q | A | I | P | A | V | L | E | G | R | D | L | M | A | S | A | Q | T | G | T | G | K | T | A | G | F | T | L | P | L | L | Q | H | L | I | T | R | Q | P | H | A | K | G | R | R | P | V | R | A | L | I | L | T | P | T | R | E | L |
Query Conservation |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|   |
|
|
|   |   |
|   |   |   |   | . | . | . | . | . |
|
|
|
|
|
|
|   |   |
|
|
Template Sequence |   |
Y | M | S | F | L | R | R | A | V | Q | L | E | R | V | I | V | V | A | G | E | T | G | S | G | K | T | T | . |
. |
. |
. |
. |
L | M | K | A | L | M | Q | E | I | P | F | D | Q | . |
. |
. |
. |
. |
R | L | I | T | I | E | D | V | P | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | T | T | S | S |  |  |  | . | . | . | . | . |  |  |  |  |  |  | T | T | S |
| T | T | S | . | . | . | . | . |
|  |  |  |  |  | S | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|