Job Description P25888 Confidence 77.76% Date Thu Jan 5 11:42:41 GMT 2012 Rank 399 Aligned Residues 75 % Identity 15% Template c1xpuB_ PDB info PDB header:transcription/rna Chain: B: PDB Molecule:rho transcription termination factor; PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb) Resolution 3.05 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	A	E	Q	G	Y	R	E	P	T	P	I	Q	Q	Q	A	I	P	A	V	L	.	.	.	E	G	R	D	L	M	A	S	A	Q	T	G	T	G	K	T	A	G	F	T	L	P	L	L	Q	H	L	I	T	R	Q	P	H	A	K	G	R	R	P	V	R	A	L	I	L	T	P	T	R	E	L	A	A	Q	I	G
Query Conservation																							.	.	.
Alig confidence																							.	.	.																		.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		N	S	R	L	R	M	G	S	T	E	D	L	T	A	R	V	L	D	L	A	S	P	I	G	R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	.	.	.	.	.	L	L	Q	N	I	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q
Template Known Secondary structure		G	S							S	T											S				T	T									S	S	S	S				.	.	.	.	.														T	T	S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		93	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		221	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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