Return to main results Retrieve Phyre Job Id

Job DescriptionP25888
Confidence94.30%DateThu Jan 5 11:42:41 GMT 2012
Rank180Aligned Residues60
% Identity27%Templatec1w36E_
PDB info PDB header:recombinationChain: E: PDB Molecule:exodeoxyribonuclease v beta chain; PDBTitle: recbcd:dna complex
Resolution3.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70..... ....80.........90.........
Predicted Secondary structure 














...

Query SS confidence 



































. . .























Query Sequence  DLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRP. . . VRALILTPTRELAAQIGENVRDYS
Query Conservation    

 








   



  
            ...   


 

 


 
         
Alig confidence 



































...























Template Conservation    

 







  
  
   

                 

 



  

 


 

   
Template Sequence  ERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNI
Template Known Secondary structure 


TTS
TT
SSTTS
SS


GGGS
Template Predicted Secondary structure 


















Template SS confidence 






























































   18.20.........30.........40.........50.........60.........70.........80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions