Return to main results Retrieve Phyre Job Id

Job DescriptionP25888
Confidence88.88%DateThu Jan 5 11:42:41 GMT 2012
Rank270Aligned Residues54
% Identity22%Templatec1mkjA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:kinesin heavy chain; PDBTitle: human kinesin motor domain with docked neck linker
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40 .........50..... ....60.........70.........80..
Predicted Secondary structure 



..





...........








Query SS confidence 











. .














. . . . . . . . . . .


























Query Sequence  QQAIPAVLEGRD. . LMASAQTGTGKTAGF. . . . . . . . . . . TLPLLQHLITRQPHAKGRRPVRALILT
Query Conservation    

  

 
  .. 

 








  ........... 



  
               


 
Alig confidence 











..














...........


























Template Conservation   
 
     
 
  
 


 





 

 
        


 
    

             
 

Template Sequence  KKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVS
Template Known Secondary structure  TT


STTSSTBSTT
TTTB
TTS
TT
Template Predicted Secondary structure 



























Template SS confidence 


































































   67..70.........80.........90.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions