Return to main results Retrieve Phyre Job Id

Job DescriptionP25888
Confidence90.03%DateThu Jan 5 11:42:41 GMT 2012
Rank246Aligned Residues27
% Identity37%Templatec1cz7C_
PDB info PDB header:contractile proteinChain: C: PDB Molecule:microtubule motor protein ncd; PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40 .........50.....
Predicted Secondary structure 



..





Query SS confidence 











. .














Query Sequence  QQAIPAVLEGRD. . LMASAQTGTGKTAGF
Query Conservation    

  

 
  .. 

 








  
Alig confidence 











..














Template Conservation    

   
 
 
  
 









 

Template Sequence  SPLIQSALDGYNICIFAYGQTGSGKTYTM
Template Known Secondary structure  TT

STTSS
Template Predicted Secondary structure 












Template SS confidence 




























   416...420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions