Return to main results Retrieve Phyre Job Id

Job DescriptionP75741
Confidence7.61%DateThu Jan 5 12:13:38 GMT 2012
Rank47Aligned Residues71
% Identity11%Templated2abka_
SCOP infoDNA-glycosylase DNA-glycosylase Endonuclease III
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80. ........90.........100.........110.........120......
Predicted Secondary structure 








......





















Query SS confidence 

























. . . . . .












































Query Sequence  DFLKQYGDFENGIPVHDTIARVVSCI. . . . . . SPAKFHECFINWMRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAI
Query Conservation    

       



 






  
......

  
  

  
            










          
Alig confidence 

























......












































Template Conservation    

          

  
 

  


             
    
       
  

  
   
    
 
  


Template Sequence  NVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCII
Template Known Secondary structure 








SS

SSS
GGGTTTTS
SSS

GGG
TT
Template Predicted Secondary structure 






























Template SS confidence 












































































   123......130.........140.........150.........160.........170.........180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions