 |
Job Description | P75741 | Confidence | 5.72% | Date | Thu Jan 5 12:13:38 GMT 2012 |
Rank | 88 | Aligned Residues | 70 |
% Identity | 16% | Template | d1ha7a_ |
SCOP info | Globin-like
| Globin-like
| Phycocyanin-like phycobilisome proteins
|
Resolution | 2.2 |
|
 |
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | Y | R | Q | A | W | K | V | E | H | K | L | S | G | I | L | L | L | T | I | F | A | V | I | S | G | A | E | S | W | E | D | I | E | D | F | G | E | T | H | L | D | F | L | K | Q | Y | G | D | F | E | N | G | I | P | V | H | D | T | I | A | . |
. |
. |
. |
. |
R | V | V | S | C | I | S | P | A | K | F | H | E |
Query Conservation |   |
|
|
|
|   |   |   |
|   |
|
|   |
|   |   |
|
|   |
|   |
|   |
|
|
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
| . | . | . | . | . |
|
|
|   |   |
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   | . | . | . | . | . |
|   |
|
|
|
|   |
|   |   |
| . |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
A | D | Q | R | G | K | D | K | C | A | R | D | I | G | Y | Y | L | R | M | V | T | Y | C | L | I | A | G | G | T | G | P | M | D | E | Y | L | . |
. |
. |
. |
. |
I | A | G | I | D | E | I | N | R | T | F | . |
E | L | S | P | S | W | Y | I | E | A | L | K | Y | I | K | A | N | H | G | L | S | G | D | A | A | T | E |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  | T | . | . | . | . | . | T | T | T |  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |
  |   |
89 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
C |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
A |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
162 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|