Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 14 Aligned Residues 296 % Identity 34% Template c3sdsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase, mitochondrial; PDBTitle: crystal structure of a mitochondrial ornithine carbamoyltransferase2 from coccidioides immitis Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		H	K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	.	.	.	.	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.																																							.	.
Template Conservation																																																																																.	.
Template Sequence		P	R	H	L	L	S	I	A	D	L	T	P	T	E	F	A	T	L	V	R	N	A	S	S	Y	K	K	T	I	K	S	D	S	M	P	E	R	L	T	G	A	L	S	G	K	T	V	A	M	M	F	S	K	R	S	T	R	T	R	V	S	T	E	G	A	V	V	K	M	G	G	H	P	M	F	L	G	K	.	.
Template Known Secondary structure					B	S		G	G	G	S																				T	T	T				G	G	G	T	T	T	T	T	T								S	S																T	T								T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	.	.	.	A	F	N	E	M	T
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		D	D	I	G	V	N	E	S	L	Y	D	T	S	V	V	I	S	S	M	V	S	C	I	V	A	R	V	G	P	H	S	D	I	A	N	L	A	K	H	S	S	V	P	V	I	N	A	L	C	D	T	F	H	P	L	Q	A	I	A	D	F	L	T	I	H	E	S	F	A	H	P	S	S	L	G	L	E	G	L	K
Template Known Secondary structure		T	T				S	S											T	S		S							S	S												S	S								S	S																	T			T	T			S		T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	.	.	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S
Query Conservation																																																			.	.
Alig confidence									.																																										.	.
Template Conservation									.
Template Sequence		I	A	W	V	G	D	A	.	N	N	V	L	F	D	L	A	I	A	A	T	K	M	G	V	N	V	A	V	A	T	P	R	G	Y	E	I	P	S	H	I	V	E	L	I	Q	K	A	R	E	G	V	Q	S	P	G	N	L	T	Q	T	T	V	P	E	V	A	V	K	D	A	D	V	I	V	T	D	T	W	K	I
Template Known Secondary structure						S			.														T	T									T	T																T	T		S	S								S						T	T	T		S
Template Predicted Secondary structure									.
Template SS confidence
		187	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	.	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.	.																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	R	L	E	A	F	K	D	F	K	V	T	S	E	L	A	K	R	G	G	A	K	E	N	W	K	F	M	H	C	L	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	E	E	V	S	D	E	V	F	Y	S	E	R	S	L	V	F	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T	T	T			B									T			T	T							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	B						T	S	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.																				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	N	R	M	H	T	I	K	A	V	M	V	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	E	N	R	L	W	A	A	I	S	A	L	E	A	F	V
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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