Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 20 Aligned Residues 303 % Identity 25% Template c3q98A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarbamylase; PDBTitle: structure of ygew encoded protein from e. coli Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	G	F	Y	H	K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S
Query Conservation
Alig confidence																																																						.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		T	S	H	L	H	E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	.	.	.	.	.	R	D	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	.	.	.	.	.	.
Template Known Secondary structure					G	G	G	S					G	G	G	S																					T	T	B						S	S								.	.	.	.	.														T				.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.													110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	.	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.
Template Sequence		.	Q	D	L	D	H	G	E	T	V	R	E	T	A	N	X	I	S	F	C	A	D	A	I	G	I	R	D	D	X	Y	L	G	A	Y	X	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	X	A	D	L	A	W	L	R	E
Template Known Secondary structure		.							T	T								T		T	T																													T	T	S		S	S										S	S
Template Predicted Secondary structure		.
Template SS confidence
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		148	.	150	.		.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.												.	.	.	.	.	.	.
Query SS confidence						.												.	.	.	.	.	.	.
Query Sequence		H	L	P	G	.	K	A	F	N	E	M	T	L	V	Y	A	.	.	.	.	.	.	.	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V
Query Conservation						.												.	.	.	.	.	.	.
Alig confidence						.												.	.	.	.	.	.	.				.
Template Conservation																												.
Template Sequence		H	F	G	S	L	E	N	L	K	G	K	K	I	A	X	T	W	A	Y	S	P	S	Y	G	K	P	.	L	S	V	P	Q	G	I	I	G	L	X	T	R	F	G	X	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	X
Template Known Secondary structure				S	S	S	G	G	G	T	T											S	S					.	T											G	G	G	T									T	T																			T							S
Template Predicted Secondary structure																												.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	X	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	X	X	E	L	T	R	D	G	E	A	L	Y	X	H	C	L	P	A	.	.	.	.
Template Known Secondary structure						T	T		S																						T	T																		T	T	T	T			B							T	S	G	G	G								S	S		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	.	.	.	.	.	.	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M	H	T	I	K	A	V	M	V	A	T	L	S	K
Query Conservation																	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	S	G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	X	I	L	S	R	K	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	B	S	S		S																			T															S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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