Job Description P04391 Confidence 32.53% Date Thu Jan 5 10:58:15 GMT 2012 Rank 481 Aligned Residues 152 % Identity 14% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.														.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query Sequence		A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	.	G	L	T	N	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																									.
Template Conservation																																																			.
Template Sequence		I	E	S	F	G	L	R	P	L	L	I	P	D	L	S	G	S	L	D	G	H	L	D	E	N	R	F	N	A	L	T	T	G	G	L	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	.	L	V	V	G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	G	V	P	D	R	R	F	G	M	L	Y	G
Template Known Secondary structure				T	T	T							S						S	S	S				S	S			T	T			S		S	B						G	G	G	S	S		S			.				S	G	G	G											S										S
Template Predicted Secondary structure																																																			.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation										.	.																																												.	.
Template Sequence		L	D	A	V	D	A	W	L	.	.	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A	Q	L	Q	D	A	M	L	D	T	H	F	M	L	S	S	A	R	T	A	I	A	A	D	.	.	P	D	L	L	L	G	F	D	A	L	L	R	S	M	G	A	H	T	V	A	A	V	V	P	A
Template Known Secondary structure										.	.								S	S																									T	T									.	.													T	T	T									S	S
Template Predicted Secondary structure										.	.																																												.	.
Template SS confidence
		271	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		192	.	.	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.
Query Sequence		C	W	P	E	.	.	.	.	.	.	.	.	.	.	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V
Query Conservation						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	A	A	L	V	D	S	P	L	P	S	V	R	V	G	D	L	E	D	L	E	H	A	A	R	A	G	Q	A	Q	L	V	I	G	N	S	H	A	L	A	S
Template Known Secondary structure				S			T	T	T	T	S	S					S													T		S						T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions