Job Description P04391 Confidence 52.07% Date Thu Jan 5 10:58:15 GMT 2012 Rank 359 Aligned Residues 156 % Identity 15% Template c3nvaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.		.	.	130	.	.
Predicted Secondary structure								.																							.	.	.										.	.	.																.	.	.				.						.	.	.	.	.	.	.	.	.
Query SS confidence								.																							.	.	.										.	.	.																.	.	.				.						.	.	.	.	.	.	.	.	.
Query Sequence		R	V	T	Y	L	G	.	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	.	.	Y	D	G	I	Q	Y	R	G	Y	.	.	.	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	.	.	.	V	W	N	.	G	L	T	N	E	.	.	.	.	.	.	.	.	.
Query Conservation								.																							.	.	.										.	.	.																.	.	.				.						.	.	.	.	.	.	.	.	.
Alig confidence								.																							.	.	.										.	.	.																.	.	.				.						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	A	L	V	E	Y	L	S	V	T	G	E	L	K	T	K	P	L	Q	H	S	V	Q	E	L	R	R	I	G	I	Q	P	D	F	I	V	G	R	A	T	L	P	L	D	D	E	T	R	R	K	I	A	L	F	T	N	V	K	V	D	H	I	V	S	S	Y	D	V	E	T	S	Y	E	V	P	I	I	L	E
Template Known Secondary structure								B		T	T	T	S		B																T				S							S	S															T			G	G	G								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
																133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	.	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	.	.	.	.	.	.	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	.	.	D	L	R	L	V	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		S	Q	K	L	V	S	K	I	L	S	R	L	K	L	E	D	R	Q	V	D	L	T	D	W	I	S	F	V	N	N	I	K	G	I	N	S	K	K	T	I	N	I	A	L	V	G	K	Y	T	K	L	K	D	S	Y	I	S	I	K	E	A	I	Y	H	A	S	A	Y	I	G	V	R	P	K	L	I	W	I	E	S
Template Known Secondary structure			T	T										T																			T	T	T	T												S	S	T	T	S	S	S	T	T														T	T										G
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		T	D	L	E	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	L	N	E	I	L	G	N	V	N	G	I	.	.	.	.	I	V	L	P	G	F	G	S	R	G	A	E	G	K	I	K	A	I	K
Template Known Secondary structure		G	G	G			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	T	S	S	S		S			.	.	.	.				S			S	S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		335	.	.	.	.	340																					.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions