Return to main results Retrieve Phyre Job Id

Job DescriptionP04391
Confidence96.79%DateThu Jan 5 10:58:15 GMT 2012
Rank92Aligned Residues111
% Identity18%Templatec3kboB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp
Resolution2.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.........210.........220.....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  QEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEG
Query Conservation   
  
   
 

 
  


   

  
        
  
    
                    
  
    
  

   
Alig confidence 

















.
.































.............













Template Conservation 
       
 
 





. .
 

  

  
  

  
              .............       
  

  
Template Sequence  WKPLPEYTREEFSVGIXG. A. GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE. . . . . . . . . . . . . SYVGREELRAFLNQ
Template Known Secondary structure 







STT


.
.STTT

SS



TT.............STTTT
Template Predicted Secondary structure 












.
.










.............





Template SS confidence 















































































   126...130.........140... . .....150.........160.........170...... ...180.........190
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  ADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEV
Query Conservation 




   
                   
 
    
   
      




                  
 

 

  

Alig confidence 




....










.........








.







.....................











Template Conservation 



 ....   


  
  .........

    
  .

 

 

.....................
 


 



 
Template Sequence  TRVLI. . . . NLLPNTAQTVG. . . . . . . . . IINSELLDQ. LPDGAYVL. . . . . . . . . . . . . . . . . . . . . NLARGVHVQEAD
Template Known Secondary structure 
S....




TTTTT.........
BST.S
TT.....................
S
GGGB
Template Predicted Secondary structure 

....







.........


.



.....................







Template SS confidence 















































































   191.... ....200...... ...210..... ....220... ......230.....
 
   306
Predicted Secondary structure 
Query SS confidence 
Query Sequence  F
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   236
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions