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Job DescriptionP04391
Confidence97.62%DateThu Jan 5 10:58:15 GMT 2012
Rank57Aligned Residues134
% Identity16%Templatec3k5pA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140...... ...150.........160.........170......
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Query Sequence  TLAEYASVPVWNGLTNEFHPTQLLADLLTMQ. . . . . . . . . . . . . . . . . . . EHLPGKAFNEMTLVYAGDARNNMGNSMLEA
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Template Sequence  KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVG. Y. GNIGSQVGNL
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   93......100.........110.........120.........130.........140.........150......... 160 .........170
 
   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  AALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQV
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Template Sequence  AESLGMTVRYYDTSDKLQY. . . . . . . . . . . . . . . GNVKPAASLDELLKTSDVVSLHVP. . . . . . . . . . . . . . . . . . SKLI
Template Known Secondary structure  TT

TT



B...............TTB
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   171........180......... 190.........200.........210... ....
 
   257..260.........270.........280.........290.........300......
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Query Sequence  NSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVF
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Template Sequence  TEAKLRK. MKKGAFLINNA. . . . . . . . . . . . . . . . . . . . . RGSDVDLEAL
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   223...... 230.........240 .........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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