Job Description P04391 Confidence 96.91% Date Thu Jan 5 10:58:15 GMT 2012 Rank 88 Aligned Residues 154 % Identity 18% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.																150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	.	.	Q	L	L	A	D	L	L	T	M	Q	E	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A
Query Conservation																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																																.
Template Sequence		W	F	Q	S	T	Y	A	G	V	D	V	L	L	D	A	R	C	R	R	D	Y	Q	L	T	N	V	R	G	I	F	G	P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	.	T
Template Known Secondary structure						S	S	S			G	G	G	S		T	T	S			S	S							S																			T	T										T	T										S	T	T								.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A
Query Conservation
Alig confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Sequence		.	G	S	I	G	Q	H	I	A	H	T	G	K	H	F	G	M	K	V	L	G	V	S	R	S	G	R	E	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	T	R	E	T	H	H	.	.	.	.
Template Known Secondary structure		.	S													T	T								S	S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S					G	G	G							T		S										S	S	S	T	T	.	.	.	.
Template Predicted Secondary structure		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	F	T	A	S	R	F	E	H	.	C	K	P	G	A	I	L	F	N	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	N	A	I	N	E	G	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	B		T	T	T	T	T		.	S		T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											211	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230																						.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions