Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 13 Aligned Residues 291 % Identity 33% Template c3grfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I
Query Conservation
Alig confidence																														.	.																																												.	.	.	.	.	.	.
Template Conservation																														.	.																																												.	.	.	.	.	.	.
Template Sequence		Q	T	R	H	L	L	T	I	S	A	L	C	P	K	E	L	A	Y	L	I	D	R	A	L	D	M	K	K	.	.	N	P	A	K	Y	T	A	R	A	A	N	K	T	L	L	A	F	F	A	K	P	S	L	R	T	R	V	S	L	E	T	A	M	T	R	L	G	G	H	A	I	Y	Y	.	.	.	.	.	.	.
Template Known Secondary structure			S			B	S	S	G	G	G	S																		.	.		G	G	G	G	T	T	T	T	T	T								S	S																	T							.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.																																												.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	.	.	.	.	.	G	K	A	F	N	E	M	T	L
Query Conservation																																																																				.	.	.	.	.
Alig confidence		.	.																																																																	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	E	L	T	V	Q	D	T	A	E	V	F	S	R	M	V	D	I	C	T	A	R	L	A	T	K	E	M	M	R	E	M	A	Q	H	A	S	V	P	C	I	N	A	L	D	D	F	G	H	P	L	Q	M	V	C	D	F	M	T	I	K	E	K	F	T	A	A	G	E	F	S	N	G	F	K	G	I	K	F
Template Known Secondary structure		.	.												T	T	T		S							S	S												S	S					S	S		S	S																				T	T			T	T	T	G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																	.	.																				.	.
Query SS confidence																																	.	.																				.	.
Query Sequence		V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	.	.	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	.	.	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V
Query Conservation																																	.	.																				.	.
Alig confidence																																	.	.																				.	.
Template Conservation
Template Sequence		A	Y	C	G	D	S	M	N	N	V	T	Y	D	L	M	R	G	C	A	L	L	G	M	E	C	H	V	C	C	P	D	H	K	D	F	K	P	I	K	E	V	I	D	E	C	E	E	I	I	A	K	H	G	T	G	G	S	I	K	I	F	H	D	C	K	K	G	C	E	G	V	D	V	V	Y	T	D	S	W	M
Template Known Secondary structure					S			S	S														T									S	S	G	G	G	S																	T									S	S						T	T		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	A	.	.	.	.	.	.	.	.	R	L	K	V	L	T	P	F	Q	V	D	D	A	V	M	A	V	.	T	S	K	R	S	I	F	M	N	C	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	R	G	E	E	Q	T	A	S	V	I	D	G	P	K	S	V	C	Y	D
Template Known Secondary structure				T	.	.	.	.	.	.	.	.						G	G	G		B						T	T	.	S		T	T							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	B						T	S	T	T	B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.									.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.																			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	N	R	M	H	T	I	K	A	V	M	V	A	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	G	N	R	L	H	S	A	M	A	V	L	D	F	F	L	H
Template Known Secondary structure																			S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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