Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 18 Aligned Residues 284 % Identity 41% Template c3gd5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase from gloeobacter2 violaceus Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Y	H	K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S
Query Conservation
Alig confidence																																.	.	.	.																																										.	.	.	.	.
Template Conservation																																.	.	.	.																																										.	.	.	.	.
Template Sequence		T	R	F	R	P	D	L	L	S	L	D	D	L	D	E	A	Q	L	H	A	L	L	T	L	A	H	Q	L	K	R	.	.	.	.	G	E	R	V	A	N	L	H	G	K	V	L	G	L	V	F	L	K	A	S	T	R	T	R	V	S	F	T	V	A	M	Y	Q	L	G	G	Q	V	I	D	L	.	.	.	.	.
Template Known Secondary structure						S		B	S	S	G	G	G	S																	T	.	.	.	.	T	S	S					T	T								S	S																T	T							.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.																																										.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	.	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y
Query Conservation																																															.
Alig confidence		.	.	.	.	.																																									.				.																				.	.
Template Conservation		.	.	.	.	.																																													.																				.	.
Template Sequence		.	.	.	.	.	E	P	V	R	D	T	A	R	V	L	G	R	Y	V	D	G	L	A	I	R	T	F	A	Q	T	E	L	E	E	Y	A	H	Y	A	G	I	P	V	I	N	A	L	T	D	.	H	E	H	P	C	Q	V	V	A	D	L	L	T	I	R	E	N	F	G	.	.	R	L	A	G	L	K	L	A	Y
Template Known Secondary structure		.	.	.	.	.											T	T	T		S							S	S												S	S								S	.	S																		S	.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.																																													.																				.	.
Template SS confidence
							91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K
Query Conservation
Alig confidence					.																																																																						.	.	.	.	.	.	.
Template Conservation					.																																																																						.	.	.	.	.	.	.
Template Sequence		V	G	D	.	G	N	N	V	A	H	S	L	L	L	G	C	A	K	V	G	M	S	I	A	V	A	T	P	E	G	F	T	P	D	P	A	V	S	A	R	A	S	E	I	A	G	R	T	G	A	E	V	Q	I	L	R	D	P	F	E	A	A	R	G	A	H	I	L	Y	T	D	V	W	.	.	.	.	.	.	.
Template Known Secondary structure			S		.															T	T									T	T																			T							S							T	T		S								.	.	.	.	.	.	.
Template Predicted Secondary structure					.																																																																						.	.	.	.	.	.	.
Template SS confidence
		163	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M
Query Conservation
Alig confidence		.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	T	H	R	L	Q	L	F	E	Q	Y	Q	I	N	A	A	L	L	N	C	.	A	A	A	E	A	I	V	L	H	C	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	R	G	E	E	I	T	D	E	V	M	E	G	P	R	S	R	I	W	D	E	A	E	N	R	L
Template Known Secondary structure		.	.	.								G	G	G		B						T	T	.	S		T	T							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	T	B						T	S	T	T	B
Template Predicted Secondary structure		.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.																			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		322	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	I	K	A	V	M	V	A	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	Q	K	A	V	L	A	A	L	M	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions