Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 21 Aligned Residues 286 % Identity 22% Template c3d6nB_ PDB info PDB header:hydrolase/transferase Chain: B: PDB Molecule:aspartate carbamoyltransferase; PDBTitle: crystal structure of aquifex dihydroorotase activated by aspartate2 transcarbamoylase Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H
Query Conservation
Alig confidence																																.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		R	S	L	I	S	S	L	D	L	T	R	E	E	V	E	E	I	L	K	Y	A	K	E	F	K	E	G	K	E	E	.	.	.	.	.	.	T	I	K	A	S	A	V	L	F	F	S	E	P	S	T	R	T	R	L	S	F	E	K	A	A	R	E	L	G	I	E	T	Y	L	V	S	G	S	E	S	S	T	V	K
Template Known Secondary structure				B			G	G	G																		T	T				.	.	.	.	.	.											S	S																T	T								T	T	T	T	S			T
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																.									.																				.
Query SS confidence																.									.																				.
Query Sequence		K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	.	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	.	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G
Query Conservation																.									.																				.
Alig confidence																.									.																				.																								.	.
Template Conservation																																																																					.	.
Template Sequence		G	E	S	F	F	D	T	L	K	T	F	E	G	L	G	F	D	Y	V	V	F	R	V	P	F	V	F	F	P	Y	K	E	I	V	K	S	L	N	L	R	L	V	N	A	G	D	G	T	H	Q	H	P	S	Q	G	L	I	D	F	F	T	I	K	E	H	F	G	.	.	E	V	K	D	L	R	V	L	Y	V	G
Template Known Secondary structure		T													T	T		S							S	S				S							T		S	S								T	T	T	B																	S	.	.			T	T							S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.
		164	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		D	A	.	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E
Query Conservation				.
Alig confidence				.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	K	H	S	R	V	F	R	S	G	A	P	L	L	N	M	F	G	A	K	I	G	V	C	G	P	K	T	L	I	P	R	D	.	.	.	.	.	.	.	.	.	.	.	V	E	V	F	K	V	D	V	F	D	D	V	D	K	G	I	D	W	A	D	V	V	I	W	L	R	L	Q	K	E	R	Q	K	E	N
Template Known Secondary structure				T	T														T	T							S		G	G	G	S		T	T	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G						S	S									S									T					T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.												.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M	H
Query Conservation
Alig confidence																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	P	S	E	S	S	Y	F	K	Q	F	G	L	T	K	E	R	F	E	.	.	.	.	K	V	K	L	Y	M	H	P	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	R	N	V	D	I	D	H	E	L	V	Y	T	E	K	S	L	I	Q	E	Q	V	K	N	G	I	P
Template Known Secondary structure		S	S	S										S	B						T	.	.	.	.	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	T	B		G	G	G	S	S	S	T	T	B
Template Predicted Secondary structure																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.																			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		323	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	K	A	V	M	V	A	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	K	A	I	Y	K	F	L	W	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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