 |
| Job Description | P04391 | | Confidence | 40.54% | Date | Thu Jan 5 10:58:15 GMT 2012 |
| Rank | 413 | Aligned Residues | 69 |
| % Identity | 14% | Template | c3btuD_ |
| PDB info |
PDB header:transcription | Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein |
PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k]
|
| Resolution | 2.85 Å |
|
| | |
157 | . | . | 160 | . | . | . | . | . | . | |
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
. | . | . | . | . | . | . | . | 220 | . | . | . | |
|
. | . | . | . | . | . | 230 |
| Predicted Secondary structure | |
|  | | | |  |
|
|
|
| . | . |
|  | | | | | | | | | | | |
|
|
| | | | | |
|
|
|
|
|
|
|
| | | | | | | | | | | | | |
|
|
| . |
| | | | |
|
| | | | | | . | . |
|
|
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| Query Sequence | |
M | T | L | V | Y | A | G | D | A | R | . |
. |
N | N | M | G | N | S | M | L | E | A | A | A | L | T | G | L | D | L | R | L | V | A | P | Q | A | C | W | P | E | A | A | L | V | T | E | C | R | A | L | A | Q | Q | N | G | G | . |
N | I | T | L | T | E | D | V | A | K | G | V | . |
. |
E | G | A | D | F | I | Y |
| Query Conservation | |
| |
| | |
|
|
| | | . | . | |
|
| | |
| | | | | | | | |
| | |
| | | | |
| | | | | | | | | | | | | | | | | | | | |
| | . | |
| | | | |
| | |
|
| | . | . | | |
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
| |
| | | |
| | | | | |
| | |
| | | | | | | | |
|
|
|
| . | . | . | . | . |
| |
| | | | | |
| | | | | | | | | | | | | | |
| | | | |
|
|
| | | | |
|
| |
| |
| Template Sequence | |
I | R | V | G | F | V | G | L | N | A | A | K | G | W | A | I | K | T | H | Y | P | A | I | L | Q | L | S | S | Q | F | Q | I | T | A | . |
. |
. |
. |
. |
L | Y | S | P | K | I | E | T | S | I | A | T | I | Q | R | L | K | L | S | N | A | T | A | F | P | T | L | E | S | F | A | S | S | S | T | I | D | M | I | V |
| Template Known Secondary structure | |
| | | | | | S |
|
| S | S | S | S | S | G | G | G | T | | | | | | | | T | T | T | T | | | | | | . | . | . | . | . | | |
| S | S | | | | | | | | | | | T | T |
| T | T |
| | |
| S | S | | | | | | |
| S | S |
| S | | | |
| Template Predicted Secondary structure | |
| | | | | |
|
|
|
|
|
|
| | | | | | | | | | | | |
|
|
|
|
| | | | | . | . | . | . | . | | |
|
|
| | | | | | | | | | | |
|
|
|
|
| | | |
|
| | | | | |
|
|
|
|
|
| | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
