Job Description P04391 Confidence 80.39% Date Thu Jan 5 10:58:15 GMT 2012 Rank 230 Aligned Residues 154 % Identity 14% Template c3aerB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q
Query Conservation
Alig confidence													.	.	.	.	.	.																																																												.	.
Template Conservation													.	.	.	.	.	.																																																												.	.
Template Sequence		L	A	T	M	G	I	K	V	N	V	C	.	.	.	.	.	.	A	P	L	G	A	S	P	D	D	L	R	K	L	G	Q	A	H	F	N	V	L	M	Y	P	E	T	G	E	S	A	A	R	H	L	E	R	A	C	K	Q	P	F	T	K	I	V	P	I	G	V	G	A	T	R	D	F	L	A	E	.	.	V	S
Template Known Secondary structure				T	T	T							.	.	.	.	.	.			T	T							T	T	G	G	G	S	S																									B							S											.	.
Template Predicted Secondary structure													.	.	.	.	.	.																																																												.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250
		147	.	.	150																					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		E	H	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	.	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.													.											.	.	.	.
Template Conservation																																								.	.																								.	.	.	.
Template Sequence		K	I	T	G	L	P	V	V	T	D	E	S	T	L	R	Q	P	W	W	S	A	S	V	D	S	T	Y	L	T	G	K	R	V	F	I	F	G	D	.	.	G	T	H	V	I	A	A	A	R	I	A	A	K	E	V	G	F	E	V	V	G	M	G	.	.	.	.	C	Y	N	R	E	M	A	R	P	L	R	T	A
Template Known Secondary structure													T	T									S	G	G	G	G	G	G	T	T							S	S	.	.														T	T									.	.	.	.		S		G	G	G
Template Predicted Secondary structure																																								.	.																								.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.	.	320	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	.	.	.	.	.	A	D	F	I	Y	T	D	V	W
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.
Template Conservation
Template Sequence		A	A	E	Y	G	L	E	A	L	I	T	D	D	Y	L	E	V	E	K	A	I	E	A	A	A	P	E	L	I	L	G	T	Q	M
Template Known Secondary structure				T	T	T							S															S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions