Job Description P04391 Confidence 100.00% Date Thu Jan 5 10:58:15 GMT 2012 Rank 16 Aligned Residues 293 % Identity 24% Template c2rgwD_ PDB info PDB header:transferase Chain: D: PDB Molecule:aspartate carbamoyltransferase; PDBTitle: catalytic subunit of m. jannaschii aspartate2 transcarbamoylase Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		K	H	F	L	K	L	L	D	F	T	P	A	E	L	N	S	L	L	Q	L	A	A	K	L	K	A	D	K	K	S	G	K	E	E	A	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	.	G	P	S	G	S	Q	I	G
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		K	H	L	I	S	M	K	D	I	G	K	E	E	I	L	E	I	L	D	E	A	R	K	M	E	E	L	L	N	T	K	R	P	L	K	L	L	E	G	K	I	L	A	T	V	F	Y	E	P	S	T	R	T	R	L	S	F	E	T	A	M	K	R	L	G	G	E	V	I	T	M	T	D	L	K	S	S	S	V	A
Template Known Secondary structure				B			G	G	G																						T	T	S				T	T	T	T								S	S																T	T									S	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	Y	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A
Query Conservation
Alig confidence																																															.	.	.																		.	.
Template Conservation																																															.	.	.																		.	.
Template Sequence		K	G	E	S	L	I	D	T	I	R	V	I	S	G	Y	A	D	I	I	V	L	R	H	P	S	E	G	A	A	R	L	A	S	E	Y	S	Q	V	P	I	I	N	A	G	Q	.	.	.	H	P	T	Q	T	L	L	D	L	Y	T	I	M	R	E	I	G	.	.	R	I	D	G	I	K	I	A	F	V	G	D	L
Template Known Secondary structure		T	T															S							S	S	T	T										S	S								.	.	.																	S	.	.		S	S	S							S
Template Predicted Secondary structure																																															.	.	.																		.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.																.
Query SS confidence		.																.
Query Sequence		.	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	.	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K
Query Conservation		.																.
Alig confidence		.																.																									.	.	.	.																																			.
Template Conservation																																											.	.	.	.																																			.
Template Sequence		K	Y	G	R	T	V	H	S	L	V	Y	A	L	S	L	F	E	N	V	E	M	Y	F	V	S	P	K	E	L	R	L	P	K	D	I	I	E	D	L	K	A	.	.	.	.	K	N	I	K	F	Y	E	K	E	S	L	D	D	L	D	D	D	I	D	V	L	Y	V	T	R	I	Q	K	E	R	F	P	D	P	.
Template Known Secondary structure		S	S												T	T	S	S	S									S	T	T													.	.	.	.	T	T							S	S	G	G	G			T	T		S									G	G	G		S	S		.
Template Predicted Secondary structure																																											.	.	.	.																																			.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	E	R	I	A	L	L	R	E	Y	Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M	H	T
Query Conservation
Alig confidence		.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	N	E	Y	E	K	V	K	G	S	Y	K	I	K	R	E	Y	V	.	.	.	E	G	K	K	F	I	I	M	H	P	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	E	I	D	Y	D	V	D	D	L	P	Q	A	K	Y	F	K	Q	S	F	Y	G	I	P	V
Template Known Secondary structure		.												B						.	.	.	T	T		S							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	B		G	G	G	T	T	S	T	T	B
Template Predicted Secondary structure		.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.																					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		324	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	V	M	V	A	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	A	I	L	K	K	L	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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