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Job Description | P04391 | Confidence | 88.03% | Date | Thu Jan 5 10:58:15 GMT 2012 |
Rank | 192 | Aligned Residues | 112 |
% Identity | 13% | Template | c2pwzG_ |
PDB info |
PDB header:oxidoreductase | Chain: G: PDB Molecule:malate dehydrogenase; |
PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase
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Resolution | 2.20 Å |
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157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | T | L | V | Y | A | G | D | A | R | N | N | M | G | N | S | M | L | E | A | A | A | L | . |
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D | L | R | L | V | A | P | Q | A | C | W | P | E | A | A | L | V | T | E | C | R | A | L | A | Q | Q | N | G | G | N | I | T | L | T | E | D | V | A | K | G | V | E | G | A | D | F | I | Y | T | D | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | K | V | A | V | L | G | . |
A | A | G | G | I | G | Q | A | L | A | L | L | L | K | T | Q | L | P | S | G | S | E | L | S | L | Y | D | I | A | . |
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P | V | T | P | G | V | A | V | D | L | S | H | I | P | T | A | V | K | I | K | G | F | S | G | E | D | A | T | P | A | L | E | G | A | D | V | V | L | I | S | A |
Template Known Secondary structure |   |
|  |  |  |  |  | T | . | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | |
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
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. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
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234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
W | V | S | M | G | E | A | K | E | K | W | A | E | R | I | A | L | L | R | E | Y | Q | V | N | S | K | M | M | Q | L | T | G | N | P | E | V | K | F | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | V | A | R | K | P | G | M | D | R | S | D | L | F | N | V | N | A | G | I | V | K | N | L | V | Q | Q | V | A | K | . |
T | C | P | K | A | C | I | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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