Job Description P04391 Confidence 77.75% Date Thu Jan 5 10:58:15 GMT 2012 Rank 245 Aligned Residues 167 % Identity 17% Template c2nloA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum Resolution 1.64 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																									.																.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																.										.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	V	A	A	Y	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	.	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	Y	.	.	.	.	.	.	.	.	.	.	G	Q	E	I	V	E	T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T
Query Conservation																									.																.										.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	A	E	G	L	A	Q	G	R	A	T	V	Y	R	R	I	D	T	L	G	S	R	A	S	G	Q	D	L	K	T	L	L	D	A	A	L	Y	L	G	F	N	G	L	N	I	T	H	P	Y	K	Q	A	V	L	P	L	L	D	E	V	S	E	Q	A	T	Q	L	G	A	V	N	T	V	V	I	D	A	T	G
Template Known Secondary structure									T	T										T	T	S	T	T	T	T	T													T	T								T	T		T	T	T	T	G	G	G	S	S										T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
			131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N
Query Conservation		.
Alig confidence		.																					.	.												.		.
Template Conservation																							.	.												.		.
Template Sequence		H	T	T	G	H	N	T	D	V	S	G	F	G	R	G	M	E	E	G	L	P	.	.	N	A	K	L	D	S	V	V	Q	V	G	.	A	.	G	G	V	G	N	A	V	A	Y	A	L	V	T	H	G	V	Q	K	L	Q	V	A	D	L	D	T	S	R	A	Q	A	L	A	D	V	I	N	N	A	V	G	R	E
Template Known Secondary structure																						T	.	.	T				S							.		.	S	T	T											T	T		S							S	S																T	S
Template Predicted Secondary structure																							.	.												.		.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.		.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	V	G	V	D	A	R	G	I	E	D	V	I	A	A	A	D	G	V	V	N	A	T
Template Known Secondary structure								S	T	T								S	S						S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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