Job Description P04391 Confidence 97.22% Date Thu Jan 5 10:58:15 GMT 2012 Rank 78 Aligned Residues 143 % Identity 15% Template c2nacA_ PDB info PDB header:oxidoreductase(aldehyde(d),nad+(a)) Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase Resolution 1.80 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	E	Y	A	S	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	L	T	M	Q	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.		.
Template Conservation																																																																							.		.
Template Sequence		Q	S	A	I	D	R	N	V	T	V	A	E	V	T	Y	C	N	S	I	S	V	A	E	H	V	V	M	M	I	L	S	L	V	R	N	Y	L	P	S	H	E	W	A	R	K	G	G	W	N	I	A	D	C	V	S	H	A	Y	D	L	E	A	M	H	V	G	T	V	A	.	A	.	G	R	I	G	L	A	V	L
Template Known Secondary structure							T	T							T	T	T	T																	T	T										T	T									T	T					T	T								.		.	S
Template Predicted Secondary structure																																																																							.		.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.		200	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	A	L	T	G	L	D	L	R	L	V	A	P	Q	A	C	W	P	E	A	A	L	V	T	E	C	R	A	L	A	Q	Q	N	G	G	N	I	T	L	T	E	D	V	A	K	G	V	E	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	E	Y
Query Conservation
Alig confidence																		.	.											.	.	.	.	.	.	.	.	.																				.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																		.	.											.	.	.	.	.	.	.	.	.																				.	.	.	.												.	.	.	.	.	.	.	.	.
Template Sequence		R	R	L	A	P	F	D	V	H	L	H	Y	T	D	R	H	.	.	R	L	P	E	S	V	E	K	E	L	.	.	.	.	.	.	.	.	.	N	L	T	W	H	A	T	R	E	D	M	Y	P	V	C	D	V	V	T	.	.	.	.	L	N	C	P	L	H	P	E	T	E	H	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G	T								S	S	.	.											.	.	.	.	.	.	.	.	.	T					S	S					G	G	G		S				.	.	.	.			S				T	T	T	T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.											.	.	.	.	.	.	.	.	.																				.	.	.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.										.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	N	S	K	M	M	Q	L	T	G	N	P	E	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	K	M	A	E	E	F	G	L	H	G	G	M	E	V	T	D	E	V	F
Query Conservation
Alig confidence											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	N	D	E	T	L	K	L	.	F	K	R	G	A	Y	I	V	N	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	K	L	C	D	R	D	A	V
Template Known Secondary structure			B	S					T	T	.	S		T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	B
Template Predicted Secondary structure											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.																						.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions